OSU Syngenta vbi

SeedGenes Profile: EMB 3011

Gene Information
Gene Symbol EMB 3011
Chromosome Locus At5g13010   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol OMA (U. Grossniklaus) Alternate Name
Gene Class Embryo Defective
Predicted Function RNA Helicase
Function Details Similar to pre-mRNA splicing factor PRP16
Gene Evidence
Single Border Recovery
Meinke / Genoplante (1 allele)
Single Border Recovery
Meinke / Salk (1 allele)
Database Release September, 2004
Predicted Sequences
Gene:6442 nucleotides
mRNA: 4209 nucleotides
Protein:  1226 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: AT3G26560.1 (47%)
Plant ESTs: Rice (Oryza sativa) (80%)
Model Genomes:  Danio rerio (62%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 250273_at
Mutant Information
Allele Symbol emb 3011-1
Mutant Class Embryo Defective
Source of Mutant Meinke / Genoplante
Mutant Line Number FBV6
Ecotype Wassilewskija
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Upstream
Terminal Phenotype Globular  Details
Nomarski Phenotype  
Allelism Evidence Reference Allele
Database Release September, 2004
Seed Color Pale Yellow
Embryo Color Pale Yellow
Percent Mutant Seeds 25.0 %
Chi - Square 0.0
Seeds Counted 897
Percent Top Half 53.1 %
Chi - Square 0.9
Average Seed Length 450 ± 60 µm
Average Embryo Length 70 ± 30 µm