SeedGenes Profile: EMB 3011

Gene Information Gene Symbol EMB 3011 Chromosome Locus At5g13010   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol OMA (U. Grossniklaus) Alternate Name Gene Class Embryo Defective Predicted Function RNA Helicase Function Details Similar to pre-mRNA splicing factor PRP16 Gene Evidence Single Border Recovery Meinke / Genoplante (1 allele) Single Border Recovery Meinke / Salk (1 allele) Database Release September, 2004 Predicted Sequences Gene: 6442 nucleotides mRNA: 4209 nucleotides Protein:   1226 amino acids cDNA Status EST Identified Top BLAST Hits Arabidopsis: AT3G26560.1 (47%) Plant ESTs: Rice (Oryza sativa) (80%) Model Genomes:   Danio rerio (62%) Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 250273_at

Mutant Information Allele Symbol emb 3011-1 emb 3011-2 Mutant Class Embryo Defective Embryo Defective Source of Mutant Meinke / Genoplante Meinke / Salk Mutant Line Number FBV6 SALK_019541 Ecotype Wassilewskija Columbia Genetic Background     ABRC Stock     Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence     Location of Mutation Upstream Exon 13 Terminal Phenotype Globular  Details Preglobular  Details Nomarski Phenotype   Images Allelism Evidence Reference Allele Sequence Identity Database Release September, 2004 December, 2010 Seed Color Pale Yellow Pale Yellow Embryo Color Pale Yellow Pale Yellow Percent Mutant Seeds 25.0 % 15.1 % Chi - Square 0.0 16.4 Seeds Counted 897 317 Percent Top Half 53.1 % 81.2 % Chi - Square 0.9 18.8 Average Seed Length 450 ± 60 µm 310 ± 150 µm Average Embryo Length 70 ± 30 µm 15 ± 0 µm