OSU Syngenta vbi

SeedGenes Profile: EMB 3011

Gene Information
Gene Symbol EMB 3011
Chromosome Locus At5g13010   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol OMA (U. Grossniklaus) Alternate Name
Gene Class Embryo Defective
Predicted Function RNA Helicase
Function Details Similar to pre-mRNA splicing factor PRP16
Gene Evidence
Single Border Recovery
Meinke / Genoplante (1 allele)
Single Border Recovery
Meinke / Salk (1 allele)
Database Release September, 2004
Predicted Sequences
Gene:6442 nucleotides
mRNA: 4209 nucleotides
Protein:  1226 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: AT3G26560.1 (47%)
Plant ESTs: Rice (Oryza sativa) (80%)
Model Genomes:  Danio rerio (62%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 250273_at
Mutant Information
Allele Symbol emb 3011-2
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_019541
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 13
Terminal Phenotype Preglobular  Details
Nomarski Phenotype   Images
Allelism Evidence Sequence Identity
Database Release December, 2010
Seed Color Pale Yellow
Embryo Color Pale Yellow
Percent Mutant Seeds 15.1 %
Chi - Square 16.4
Seeds Counted 317
Percent Top Half 81.2 %
Chi - Square 18.8
Average Seed Length 310 ± 150 µm
Average Embryo Length 15 ± 0 µm