OSU Syngenta vbi

SeedGenes Profile: EMB 3116

Gene Information
Gene Symbol EMB 3116
Chromosome Locus At2g44190   tair
Alleles in Database 5   See List OR Show All
Identity Confidence Confirmed
Alias Symbol EDE 1 (M. Hills) Sequence Identity
Gene Class Embryo Defective
Predicted Function Novel Microtubule Associated Protein
Function Details Endosperm nuclear division and cellularization
Gene Evidence
Sequenced Mutant Allele
M. Hills (1 allele)
Molecular Complementation
M. Hills (1 allele)
Border Recovery
Hills / Salk (2 alleles)
Border Recovery
Myouga / Riken (2 alleles)
Database Release December, 2010
Predicted Sequences
Gene:2307 nucleotides
mRNA: 1745 nucleotides
Protein:  474 amino acids
cDNA Status FLcDNA Available: BX818775
Top BLAST Hits
Arabidopsis: AT3G60000.1 (57%)
Plant ESTs: Brassica napus (76%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 267232_at
    
Mutant Information
Allele Symbol emb 3116-1emb 3116-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Myouga / RikenMyouga / Riken
Mutant Line Number RATM12-5223-1RATM15-2706-1
Ecotype NossenNossen
Genetic Background   
ABRC Stock   
Mutagen Treatment TransposonTransposon
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Exon 1Exon 1
Terminal Phenotype PreglobularPreglobular
Nomarski Phenotype GlobularGlobular
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds 24.5 %22.3 %
Chi - Square <0.10.7
Seeds Counted 269188
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length