OSU Syngenta vbi

SeedGenes Profile: FIP 37

Gene Information
Gene Symbol FIP 37
Chromosome Locus At3g54170   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function FKBP12 Interacting Protein
Function Details Putative role in alternative pre-mRNA splicing
Gene Evidence
Border Recovery
M. Herzog (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release March, 2003
Predicted Sequences
Gene:2818 nucleotides
mRNA: 1262 nucleotides
Protein:  330 amino acids
cDNA Status FLcDNA Available: AY063940
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (84%)
Model Genomes:   None
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 251887_at
Mutant Information
Allele Symbol fip 37-1S
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 104176
Ecotype Columbia
Genetic Background  
ABRC Stock CS16192
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Intron 8
Terminal Phenotype Globular  Details
Nomarski Phenotype   Images
Allelism Evidence Reference Allele
Database Release March, 2003
Seed Color White to Pale Yellow
Embryo Color White to Pale Yellow
Percent Mutant Seeds 24.4 %
Chi - Square 0.3
Seeds Counted 1203
Percent Top Half 51.2 %
Chi - Square 0.2
Average Seed Length 460 ± 70 µm
Average Embryo Length 50 ± 10 µm