Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: FIP 37
Gene Information
Gene Symbol
FIP 37
Chromosome Locus
At3g54170
Alleles in Database
2
See List
OR
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Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
FKBP12 Interacting Protein
Function Details
Putative role in alternative pre-mRNA splicing
Gene Evidence
Border Recovery
M. Herzog (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release
March, 2003
Predicted Sequences
Gene:
2818 nucleotides
mRNA:
1262 nucleotides
Protein:
330 amino acids
cDNA Status
FLcDNA Available:
AY063940
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (84%)
Model Genomes:
None
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
251887_at
Mutant Information
Allele Symbol
fip 37-1S
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Syngenta
Mutant Line Number
104176
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16192
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Intron 8
Terminal Phenotype
Globular
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
March, 2003
Seed Color
White to Pale Yellow
Embryo Color
White to Pale Yellow
Percent Mutant Seeds
24.4 %
Chi - Square
0.3
Seeds Counted
1203
Percent Top Half
51.2 %
Chi - Square
0.2
Average Seed Length
460 ± 70 µm
Average Embryo Length
50 ± 10 µm