OSU Syngenta vbi

SeedGenes Profile: FIP 37

Gene Information
Gene Symbol FIP 37
Chromosome Locus At3g54170   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function FKBP12 Interacting Protein
Function Details Putative role in alternative pre-mRNA splicing
Gene Evidence
Border Recovery
M. Herzog (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release March, 2003
Predicted Sequences
Gene:2818 nucleotides
mRNA: 1262 nucleotides
Protein:  330 amino acids
cDNA Status FLcDNA Available: AY063940
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (84%)
Model Genomes:   None
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 251887_at
    
Mutant Information
Allele Symbol fip 37-1Sfip 37-1
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Meinke / SyngentaHerzog / Versailles
Mutant Line Number 104176 
Ecotype ColumbiaWassilewskija
Genetic Background   
ABRC Stock CS16192 
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence Details  (Help) 
Location of Mutation Intron 8 
Terminal Phenotype Globular  DetailsGlobular
Nomarski Phenotype   Images
Allelism Evidence Reference AlleleSequence Identity
Database Release March, 2003March, 2003
Seed Color White to Pale Yellow 
Embryo Color White to Pale Yellow 
Percent Mutant Seeds 24.4 % 
Chi - Square 0.3 
Seeds Counted 1203 
Percent Top Half 51.2 % 
Chi - Square 0.2 
Average Seed Length 460 ± 70 µm 
Average Embryo Length 50 ± 10 µm