SeedGenes Profile: PAC

Gene Information Gene Symbol PAC Chromosome Locus At2g48120   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function Uncertain Function Details Postulated to function in chloroplast mRNA maturation Gene Evidence Molecular Complementation P. Scolnik (1 allele) Border Recovery P. Scolnik (1 allele) Single Border Recovery Meinke / Syngenta (1 allele) Database Release March, 2002 Predicted Sequences Gene: 1817 nucleotides mRNA: 1277 nucleotides Protein:   313 amino acids cDNA Status FLcDNA Available: L35241 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (88%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 262316_at

Mutant Information Allele Symbol pac-1S pac-1 Mutant Class Seed Pigment Seed Pigment Source of Mutant Meinke / Syngenta Scolnik / Feldmann Mutant Line Number 54333   Ecotype Columbia Wassilewskija Genetic Background     ABRC Stock CS16058   Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence Details  (Help)   Location of Mutation Exon 2 Exon 4 Terminal Phenotype Pigment Defective Pigment Defective Nomarski Phenotype Allelism Evidence Reference Allele Sequence Identity Database Release March, 2002 March, 2002 Seed Color Pale Yellow   Embryo Color Pale Yellow   Percent Mutant Seeds 24.2 %   Chi - Square 0.4   Seeds Counted 1030   Percent Top Half 52.2 %   Chi - Square 0.5   Average Seed Length     Average Embryo Length