SeedGenes Profile: PDE 149

Gene Information Gene Symbol PDE 149 Chromosome Locus At5g12130   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol AtTERC (H. Cho) Alternate Name Gene Class Seed Pigment Predicted Function Transmembrane Transport Protein Function Details   Gene Evidence Molecular Complementation H. Cho (1 allele) Border Recovery Cho / Salk (1 allele) Border Recovery Cho / GABI (1 allele) Single Border Recovery Meinke / Syngenta (1 allele) Database Release September, 2002 Predicted Sequences Gene: 2892 nucleotides mRNA: 1505 nucleotides Protein:   384 amino acids cDNA Status FLcDNA Available: AY086401 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (80%) Model Genomes:   Escherichia coli (43%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 250315_at

Mutant Information Allele Symbol pde 149 atterC-1 Mutant Class Seed Pigment Seed Pigment Source of Mutant Meinke / Syngenta Cho / Salk Mutant Line Number 9021 SALK_014736 Ecotype Columbia Columbia Genetic Background     ABRC Stock CS16130   Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence Details  (Help)   Location of Mutation Intron 6 Intron 2 Terminal Phenotype Pigment Defective Pigment Defective Nomarski Phenotype Allelism Evidence Reference Allele Sequence Identity Database Release September, 2002 December, 2010 Seed Color Pale Yellow   Embryo Color Pale Yellow   Percent Mutant Seeds 24.5 %   Chi - Square 0.2   Seeds Counted 1099   Percent Top Half 55.3 %   Chi - Square 3.1   Average Seed Length     Average Embryo Length