SeedGenes Profile: PDE 226

Gene Information Gene Symbol PDE 226 Chromosome Locus At4g14210   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol PDS 3 (TAIR) Sequence Identity Gene Class Seed Pigment Predicted Function Phytoene Desaturase Function Details Carotenoid biosynthesis Gene Evidence Double Border Recovery Meinke / Syngenta (1 allele) Molecular Complementation L.J. Qu (1 allele) Border Recovery L.J. Qu (1 allele) Border Recovery Qu / Salk (1 allele) Database Release March, 2002 Predicted Sequences Gene: 5054 nucleotides mRNA: 2213 nucleotides Protein:   566 amino acids cDNA Status FLcDNA Available: AF360196 Top BLAST Hits Arabidopsis: AT3G04870.1 (30%) Plant ESTs: Soybean (Glycine max) (81%) Model Genomes:   Synechocystis (65%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 245284_at

Mutant Information Allele Symbol pde 226 Mutant Class Seed Pigment Source of Mutant Meinke / Syngenta Mutant Line Number 19414 Ecotype Uncertain Genetic Background   ABRC Stock CS16064 Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence Details  (Help) Location of Mutation Intron 12 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Reference Allele Database Release March, 2002 Seed Color White Embryo Color White Percent Mutant Seeds 24.0 % Chi - Square 0.6 Seeds Counted 806 Percent Top Half 53.0 % Chi - Square 0.3 Average Seed Length   Average Embryo Length