Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: PDE 247
Gene Information
Gene Symbol
PDE 247
Chromosome Locus
At1g05750
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
CLB 19
(P. Leon) Sequence Identity
Gene Class
Seed Pigment
Predicted Function
PPR Protein
Function Details
Processing of organellar mRNAs
Gene Evidence
Double Border Recovery
Meinke / Syngenta (2 alleles)
Database Release
March, 2002
Predicted Sequences
Gene:
3226 nucleotides
mRNA:
3226 nucleotides
Protein:
500 amino acids
cDNA Status
FLcDNA Available:
BX814507
Top BLAST Hits
Arabidopsis
:
AT2G20540.1 (39%)
Plant ESTs:
Medicago truncatula (54%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
261310_at
Mutant Information
Allele Symbol
pde 247-1
Mutant Class
Seed Pigment
Source of Mutant
Meinke / Syngenta
Mutant Line Number
23147
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16065
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 1
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
March, 2002
Seed Color
Pale Yellow
Embryo Color
Pale Yellow
Percent Mutant Seeds
26.0 %
Chi - Square
0.4
Seeds Counted
1033
Percent Top Half
51.0 %
Chi - Square
0.2
Average Seed Length
Average Embryo Length