SeedGenes Profile: PDE 247

Gene Information Gene Symbol PDE 247 Chromosome Locus At1g05750   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol CLB 19 (P. Leon) Sequence Identity Gene Class Seed Pigment Predicted Function PPR Protein Function Details Processing of organellar mRNAs Gene Evidence Double Border Recovery Meinke / Syngenta (2 alleles) Database Release March, 2002 Predicted Sequences Gene: 3226 nucleotides mRNA: 3226 nucleotides Protein:   500 amino acids cDNA Status FLcDNA Available: BX814507 Top BLAST Hits Arabidopsis: AT2G20540.1 (39%) Plant ESTs: Medicago truncatula (54%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 261310_at

Mutant Information Allele Symbol pde 247-1 pde 247-2 Mutant Class Seed Pigment Seed Pigment Source of Mutant Meinke / Syngenta Meinke / Syngenta Mutant Line Number 23147 95262 Ecotype Columbia Columbia Genetic Background     ABRC Stock CS16065 CS16141 Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence     Location of Mutation Exon 1 Exon 1 Terminal Phenotype Pigment Defective Pigment Defective Nomarski Phenotype Allelism Evidence Reference Allele Complementation Test; Sequence Identity Database Release March, 2002 September, 2002 Seed Color Pale Yellow White Embryo Color Pale Yellow White Percent Mutant Seeds 26.0 % 24.9 % Chi - Square 0.4 <0.1 Seeds Counted 1033 1077 Percent Top Half 51.0 % 51.5 % Chi - Square 0.2 0.2 Average Seed Length     Average Embryo Length