SeedGenes Profile: PDE 277

Gene Information Gene Symbol PDE 277 Chromosome Locus At2g26930   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol ISPE (TAIR) Alternate Name Gene Class Seed Pigment Predicted Function Isoprenoid Biosynthesis in Plastids Function Details Enzyme in deoxyxylulose phosphate pathway of terpenoid biosynthesis Gene Evidence Border Recovery Chen / Salk (1 allele) Double Border Recovery Meinke / Syngenta (1 allele) Database Release September, 2002 Predicted Sequences Gene: 2560 nucleotides mRNA: 1311 nucleotides Protein:   383 amino acids cDNA Status FLcDNA Available: AY136394 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (89%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 266863_at

Mutant Information Allele Symbol pde 277 Mutant Class Seed Pigment Source of Mutant Meinke / Syngenta Mutant Line Number 38108 Ecotype Columbia Genetic Background   ABRC Stock CS16108 Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence Details  (Help) Location of Mutation Intron 9 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Reference Allele Database Release September, 2002 Seed Color White Embryo Color White Percent Mutant Seeds 18.9 % Chi - Square 21.6 Seeds Counted 1103 Percent Top Half 62.2 % Chi - Square 12.4 Average Seed Length   Average Embryo Length