OSU Syngenta vbi

SeedGenes Profile: PDE 318

Gene Information
Gene Symbol PDE 318
Chromosome Locus At1g80770   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Seed Pigment
Predicted Function Uncertain
Function Details GTP binding protein
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Border Recovery
Meinke / Salk (2 alleles)
Database Release September, 2003
Predicted Sequences
Gene:2848 nucleotides
mRNA: 1683 nucleotides
Protein:  451 amino acids
cDNA Status FLcDNA Available: AY128318
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (90%)
Model Genomes:  Homo sapiens (26%)
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 261882_at
Mutant Information
Allele Symbol pde 318-1
Mutant Class Seed Pigment
Source of Mutant Meinke / Syngenta
Mutant Line Number 102326
Ecotype Columbia
Genetic Background  
ABRC Stock CS16228
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Intron 7 to Exon 8
Terminal Phenotype Pigment Defective
Nomarski Phenotype  
Allelism Evidence Reference Allele
Database Release September, 2003
Seed Color Pale Green to Green
Embryo Color Pale Green to Green
Percent Mutant Seeds 22.7 %
Chi - Square 2.6
Seeds Counted 909
Percent Top Half 54.9 %
Chi - Square 1.9
Average Seed Length  
Average Embryo Length