Aug 17, 2018 4:34 PM
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Database Query
SeedGenes Profile: SUS 2
Gene Information
Gene Symbol
SUS 2
Chromosome Locus
At1g80070
Alleles in Database
3
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
EMB 177
(D. Meinke) Alternate Name
Gene Class
Embryo Defective
Predicted Function
PRP8 Splicing Factor
Function Details
Pre-mRNA processing (PRP) factor and U5 snRNP component required for spliceosome function
Gene Evidence
Double Border Recovery
Meinke / Syngenta (2 alleles)
Database Release
March, 2002
Predicted Sequences
Gene:
9760 nucleotides
mRNA:
7386 nucleotides
Protein:
2382 amino acids
cDNA Status
EST Identified
Top BLAST Hits
Arabidopsis
:
AT4G38780.1 (93%)
Plant ESTs:
Rice (Oryza sativa) (93%)
Model Genomes:
Homo sapiens (82%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
262068_at
Mutant Information
Allele Symbol
sus 2-5
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Syngenta
Mutant Line Number
69077
Ecotype
Columbia
Genetic Background
qrt
ABRC Stock
CS16073
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Exon 2 to Intron 3
Terminal Phenotype
Globular
Details
Nomarski Phenotype
Images
Allelism Evidence
Complementation Test; Sequence Identity
Database Release
March, 2002
Seed Color
Pale Yellow
Embryo Color
Pale Yellow
Percent Mutant Seeds
27.3 %
Chi - Square
2.5
Seeds Counted
852
Percent Top Half
51.1 %
Chi - Square
0.1
Average Seed Length
540 ± 40 µm
Average Embryo Length
120 ± 30 µm