OSU Syngenta vbi

SeedGenes Profile: SUS 2

Gene Information
Gene Symbol SUS 2
Chromosome Locus At1g80070   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol EMB 177 (D. Meinke) Alternate Name
Gene Class Embryo Defective
Predicted Function PRP8 Splicing Factor
Function Details Pre-mRNA processing (PRP) factor and U5 snRNP component required for spliceosome function
Gene Evidence
Double Border Recovery
Meinke / Syngenta (2 alleles)
Database Release March, 2002
Predicted Sequences
Gene:9760 nucleotides
mRNA: 7386 nucleotides
Protein:  2382 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: AT4G38780.1 (93%)
Plant ESTs: Rice (Oryza sativa) (93%)
Model Genomes:  Homo sapiens (82%)
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 262068_at
Mutant Information
Allele Symbol sus 2-5
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 69077
Ecotype Columbia
Genetic Background qrt
ABRC Stock CS16073
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Exon 2 to Intron 3
Terminal Phenotype Globular  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release March, 2002
Seed Color Pale Yellow
Embryo Color Pale Yellow
Percent Mutant Seeds 27.3 %
Chi - Square 2.5
Seeds Counted 852
Percent Top Half 51.1 %
Chi - Square 0.1
Average Seed Length 540 ± 40 µm
Average Embryo Length 120 ± 30 µm