Aug 17, 2018 4:34 PM
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Database Query
SeedGenes Profile: TTN 1
Gene Information
Gene Symbol
TTN 1
Chromosome Locus
At3g60740
Alleles in Database
3
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
CHO
(G. Jurgens) Sequence Identity
EMB 133
(D. Meinke) Alternate Name
Gene Class
Embryo Defective
Predicted Function
Tubulin Folding Cofactor D
Function Details
Postulated to interact with TTN5 protein to regulate B-tubulin folding and microtubule dynamics
Gene Evidence
Double Border Recovery
Meinke / Syngenta (2 alleles)
Database Release
March, 2002
Predicted Sequences
Gene:
6120 nucleotides
mRNA:
3944 nucleotides
Protein:
1254 amino acids
cDNA Status
FLcDNA Available:
AF486851
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Rice (Oryza sativa) (58%)
Model Genomes:
Danio rerio (35%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
251383_at
Mutant Information
Allele Symbol
ttn 1-2
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Syngenta
Mutant Line Number
29862
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16074
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Exon 2
Terminal Phenotype
Preglobular
Details
Nomarski Phenotype
Preglobular
Images
Allelism Evidence
Reference Allele
Database Release
March, 2002
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
22.2 %
Chi - Square
4.4
Seeds Counted
1054
Percent Top Half
55.5 %
Chi - Square
2.9
Average Seed Length
420 ± 70 µm
Average Embryo Length
20 ± 10 µm