OSU Syngenta vbi

SeedGenes Profile: EMB 1706

Gene Information
Gene Symbol EMB 1706
Chromosome Locus At4g10760   tair
Alleles in Database 4   See List OR Show All
Identity Confidence Confirmed
Alias Symbol MTA (R. Fray) Sequence Identity
Gene Class Embryo Defective
Predicted Function Methyltransferase MT-A70
Function Details Adenine methylation in pre-mRNAs
Gene Evidence
Double Border Recovery
Meinke / Syngenta (2 alleles)
Single Border Recovery
Fray / Salk (2 alleles)
Database Release September, 2004
Predicted Sequences
Gene:3535 nucleotides
mRNA: 2227 nucleotides
Protein:  685 amino acids
cDNA Status FLcDNA Available: AK227385
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Soybean (Glycine max) (67%)
Model Genomes:  Danio rerio (58%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 254994_at
    
Mutant Information
Allele Symbol emb 1706-1emb 1706-2emb 1706-3emb 1706-4
Mutant Class Embryo DefectiveEmbryo DefectiveEmbryo DefectiveEmbryo Defective
Source of Mutant Meinke / SyngentaMeinke / SyngentaFray / SalkFray / Salk
Mutant Line Number 3534541510SALK_074069SALK_114710
Ecotype ColumbiaColumbiaColumbiaColumbia
Genetic Background     
ABRC Stock     
Mutagen Treatment T-DNAT-DNAT-DNAT-DNA
Insertion Mutant Yes   DetailsYes   DetailsYes   DetailsYes   Details
Flanking Sequence Details  (Help)Details  
Location of Mutation Exon 1Exon 6Exon 4Exon 6
Terminal Phenotype Cotyledon  DetailsGlobular  DetailsGlobularGlobular
Nomarski Phenotype   Images  Images
Allelism Evidence Reference AlleleComplementation Test; Sequence IdentitySequence IdentitySequence Identity
Database Release September, 2004September, 2004December, 2010December, 2010
Seed Color Pale YellowWhite  
Embryo Color Pale YellowWhite  
Percent Mutant Seeds 24.5 %24.6 %  
Chi - Square 0.10.1  
Seeds Counted 9971029  
Percent Top Half 48.0 %51.8 %  
Chi - Square 0.40.3  
Average Seed Length 560 ± 60 µm460 ± 60 µm  
Average Embryo Length 160 ± 70 µm70 ± 30 µm