OSU Syngenta vbi

SeedGenes Profile: DET 1

Gene Information
Gene Symbol DET 1
Chromosome Locus At4g10180   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol FUS 2 (S. Misera) Complemetation Test
Gene Class Seed Pigment
Predicted Function Nuclear-Localized Protein
Function Details Light-regulated signal transduction
Gene Evidence
Sequenced Mutant Allele
J. Chory (1 allele)
Molecular Complementation
J. Chory (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release March, 2002
Predicted Sequences
Gene:2814 nucleotides
mRNA: 1842 nucleotides
Protein:  543 amino acids
cDNA Status FLcDNA Available: BX826906
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Tomato (Lycopersicon esculentum) (71%)
Model Genomes:  Danio rerio (30%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 255799_at
    
Mutant Information
Allele Symbol det 1-1det 1-1S
Mutant Class Seed PigmentSeed Pigment
Source of Mutant J. ChoryMeinke / Syngenta
Mutant Line Number  100654
Ecotype ColumbiaColumbia
Genetic Background   
ABRC Stock CS6158CS16146
Mutagen Treatment UncertainT-DNA
Insertion Mutant NoYes   Details
Flanking Sequence  Details  (Help)
Location of Mutation Intron 1Intron 8 to Exon 9
Terminal Phenotype FuscaFusca
Nomarski Phenotype
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release March, 2002September, 2002
Seed Color FuscaFusca
Embryo Color FuscaFusca
Percent Mutant Seeds 22.6 %26.9 %
Chi - Square 3.72.2
Seeds Counted 11701103
Percent Top Half 53.0 %48.5 %
Chi - Square 1.00.3
Average Seed Length   
Average Embryo Length